miRBase entry: dps-mir-3983

Stem-loop dps-mir-3983


Accession
MI0011624
Description
Drosophila pseudoobscura dps-mir-3983 precursor miRNA


Sequence

gucccgcaccauAGAUGCCACUAAGAGAUCACggguuguauugaaaaaccccgugaauucuuccagugccauuaacugugccgggaug
(((((((((....((((.(((((((((.(((((((((.........)).))))))).)))))..)))).))))....))).)))))).

Structure
-      -   cauA    C    --     A       -  gua 
 gucccg cac    GAUG CACU  AAGAG UCACggg uu   u
 |||||| |||    |||| ||||  ||||| ||||||| ||   u
 uagggc gug    uuac guga  uucuu agugccc aa   g
g      c   ucaa    c    cc     a       c  aaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
4_group3: 7322805-7322892 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dps-mir-3983
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dps-miR-3983

Accession MIMAT0012282
Description Drosophila pseudoobscura dps-miR-3983 mature miRNA
Sequence 13 - AGAUGCCACUAAGAGAUCAC - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9