miRBase entry: dps-mir-929

Stem-loop dps-mir-929


Accession
MI0011616
Description
Drosophila pseudoobscura dps-mir-929 precursor miRNA
Gene family
MIPF0000447; mir-929


Sequence

cacggcaauuccugcagcaguucAAAUUGACUCUAGUAGGGAGUCcuuuuauugagcgaCUCCCUAACGGAGUCAGAUUGAauuaccaaggaac
........(((((...(.(((((((.((((((((..((((((((((((.....))).)))))))))..)))))))).))))))).)..))))).

Structure
cacggcaa     gca c       A        AG         -   u 
        uuccu   g aguucAA UUGACUCU  UAGGGAGUC cuu u
        |||||   | ||||||| ||||||||  ||||||||| ||| a
        aagga   c uuaAGUU GACUGAGG  AUCCCUCag gag u
-------c     -ac a       A        CA         c   u 


Annotation confidence Not enough data
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Genome context
2: 24810847-24810940 [-]

Database links

Mature dps-miR-929-5p

Accession MIMAT0012267
Description Drosophila pseudoobscura dps-miR-929-5p mature miRNA
Sequence 24 - AAAUUGACUCUAGUAGGGAGUC - 45
Evidence experimental
Illumina [1]

Mature dps-miR-929-3p

Accession MIMAT0012268
Description Drosophila pseudoobscura dps-miR-929-3p mature miRNA
Sequence 60 - CUCCCUAACGGAGUCAGAUUGA - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9