miRBase entry: dps-mir-932

Stem-loop dps-mir-932


Accession
MI0011612
Description
Drosophila pseudoobscura dps-mir-932 precursor miRNA
Gene family
MIPF0000588; mir-932


Sequence

ggucguuacugcauuggugucguggcucUCAAUUCCGUAGUGCAUUGCAGUuuaauauaauuaucaacaacUGCAAGCGCUGUGGACUUGGCAgcuccgauagccgcaaacacagcug
(((.((...(((...(.(((((.((((.((((.((((((((((.((((((((..(((....)))....)))))))))))))))))).)))).)))).))))).).)))...)).))).

Structure
-   c  uac   auu g     u    c    U          A        --ua   u 
 ggu gu   ugc   g ugucg ggcu UCAA UCCGUAGUGC UUGCAGUu    aua a
 ||| ||   |||   | ||||| |||| |||| |||||||||| ||||||||    |||  
 ucg ca   acg   c auagc ucgA GGUU AGGUGUCGCG AACGUcaa    uau a
g   a  caa   --c g     c    C    C          -        caac   u 


Annotation confidence Not enough data
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Genome context
4_group5: 397108-397225 [+]

Database links

Mature dps-miR-932-5p

Accession MIMAT0012259
Description Drosophila pseudoobscura dps-miR-932-5p mature miRNA
Sequence 29 - UCAAUUCCGUAGUGCAUUGCAGU - 51
Evidence experimental
Illumina [1]

Mature dps-miR-932-3p

Accession MIMAT0012260
Description Drosophila pseudoobscura dps-miR-932-3p mature miRNA
Sequence 72 - UGCAAGCGCUGUGGACUUGGCA - 93
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9