miRBase entry: dps-mir-958

Stem-loop dps-mir-958


Accession
MI0011598
Description
Drosophila pseudoobscura dps-mir-958 precursor miRNA
Gene family
MIPF0000912; mir-958


Sequence

cgaucgguguguauuuggcaAGUAGAAUAGCAGGCUUAUCACAuguuccauucaauccgcugUGAGAUUCUUCUAUUCUACUUUcgacaaacacccguug
((((.(((((....((((.(((((((((((.(((....(((((.((............)))))))....))))))))))))))))))...))))).))))

Structure
    c     guau    c           C   CUUA     u  uccau 
cgau ggugu    uugg aAGUAGAAUAG AGG    UCACA gu     u
|||| |||||    |||| ||||||||||| |||    ||||| ||      
guug ccaca    agcU UUCAUCUUAUC UUC    AGUgu cg     c
    c     -aac    -           -   UUAG     -  ccuaa 


Annotation confidence Not enough data
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Genome context
XR_group8: 344180-344279 [-]

Database links

Mature dps-miR-958-5p

Accession MIMAT0012231
Description Drosophila pseudoobscura dps-miR-958-5p mature miRNA
Sequence 21 - AGUAGAAUAGCAGGCUUAUCACA - 43
Evidence experimental
Illumina [1]

Mature dps-miR-958-3p

Accession MIMAT0012232
Description Drosophila pseudoobscura dps-miR-958-3p mature miRNA
Sequence 63 - UGAGAUUCUUCUAUUCUACUUU - 84
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9