miRBase entry: dme-mir-2494

Stem-loop dme-mir-2494


Accession
MI0011583
Description
Drosophila melanogaster dme-mir-2494 precursor miRNA
Gene family
MIPF0000975; mir-2494

Literature search
2 open access papers mention dme-mir-2494
(2 sentences)

Sequence

695 reads, 72 reads per million, 29 experiments
uccaucuuccgaccggcgaucaGUAAGUGCACCAGAUUGGGAAuaaccuucaaaagcugcaacuuaaauaUUCCCAGUAAUGUCCACUUACAAGgagccccugguuggaugggugga
(((((((((((((((((.....(((((((.((...((((((((((.......................))))))))))...)).))))))).....)))...))))))).)))))))

Structure
       -       ---   gauca       C  CAG          accuucaaaa 
uccaucu uccgacc   ggc     GUAAGUG AC   AUUGGGAAua          g
||||||| |||||||   |||     ||||||| ||   ||||||||||          c
agguggg agguugg   ccg     CAUUCAC UG   UGACCCUUau          u
       u       ucc   agGAA       C  UAA          aaauucaacg 


Annotation confidence High
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Genome context
chr3R: 16618766-16618882 [+]

Database links

Mature dme-miR-2494-5p

Accession MIMAT0012202
Description Drosophila melanogaster dme-miR-2494-5p mature miRNA
Sequence 23 - GUAAGUGCACCAGAUUGGGAA - 43
Evidence experimental
Illumina [1]
Database links

Mature dme-miR-2494-3p

Accession MIMAT0012203
Description Drosophila melanogaster dme-miR-2494-3p mature miRNA
Sequence 71 - UUCCCAGUAAUGUCCACUUACAAG - 94
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9