Stem-loop sequence bdi-MIR171c

AccessionMI0011571 (change log)
DescriptionBrachypodium distachyon miR171c stem-loop
Gene family MIPF0000030; MIR171_1
Literature search

1 open access papers mention bdi-MIR171c
(2 sentences)

Stem-loop 
   cgc        ug             a  cu  c     ggac 
5'    gguauugg  cgguucaaucaga ag  gg gcucc    g
      ||||||||  ||||||||||||| ||  || |||||     
3'    cuauaacc  gccgaguuaguuu uc  cc ugggg    c
   -ca        gu             c  -u  u     aaaa
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Bd21; GCA_000005505.1) Overlapping transcripts
5: 24711141-24711226 [-]
intergenic
Database links

Mature sequence bdi-miR171c-5p

Accession MIMAT0026923
Sequence

3 -  

cgguauuggugcgguucaauc

 - 23

Get sequence
Evidence experimental; Illumina [2]

Mature sequence bdi-miR171c-3p

Accession MIMAT0012186
Sequence

64 -  

ugauugagccgugccaauauc

 - 84

Get sequence
Evidence experimental; Illumina [2]

References

1
PMID:19585143 "Conserved microRNAs and their targets in model grass species Brachypodium distachyon" Unver T, Budak H Planta. 230:659-669(2009).
2
PMID:23264558 "Addressing the role of microRNAs in reprogramming leaf growth during drought stress in Brachypodium distachyon" Bertolini E, Verelst W, Horner DS, Gianfranceschi L, Piccolo V, Inze D, Pe ME, Mica E Mol Plant. 6:423-443(2013).