miRBase entry: bdi-MIR172d

Stem-loop bdi-MIR172d


Accession
MI0011567
Description
Brachypodium distachyon bdi-MIR172d precursor miRNA

Literature search
6 open access papers mention bdi-MIR172d
(13 sentences)

Sequence

uggagccaucgggucaaaccggaaugaggccgguguggcggcgggggcagcugucgugguggcaguuuuggAGAAUCCUGAUGAUGCUGCAGc
((.((((((((((.....(((((((...((((.(((((((((.......))))))))).)))).))))))).....)))))))..))).))..

Structure
--  g   --       ucaaa       gag    g         gg 
  ug agc  caucggg     ccggaau   gccg uguggcggc  g
  || |||  |||||||     |||||||   |||| |||||||||  g
  AC UCG  GUAGUCC     gguuuug   cggu gugcugucg  g
cG  G   UA       UAAGA       --a    g         ac 


Annotation confidence Not enough data
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Genome context
2: 38183339-38183431 [-]

Database links

Mature bdi-miR172d

Accession MIMAT0012182
Description Brachypodium distachyon bdi-miR172d mature miRNA
Sequence 72 - AGAAUCCUGAUGAUGCUGCAG - 92
Evidence not_experimental

References

  1. PubMed ID: 19585143
    Conserved microRNAs and their targets in model grass species Brachypodium distachyon
    "Unver T, Budak H"
    "Planta (2009) 230:659-669