Stem-loop bdi-MIR1139

Accession

MI0011562

Description

Brachypodium distachyon bdi-MIR1139 precursor miRNA

Gene family

MIPF0000810; MIR1139

Literature search

1 open access papers mention bdi-MIR1139
(2 sentences)

Sequence

uccucugauuggacuauuauuuguucgcacuaucacgaggcuugaggcuggucacaguggcGAGUAACAUACACUAGUAACAugcauauauuaaaguaguaacauauaagucucauuuau
.(((((((((((((........)))))....)))).))))..(((((((.((.((((((............)))).)).)).(((.(((......)))))).......))))))).....

Structure

uccucugauuggacuauuauuuguucgcacuaucacgaggcu       --------------------------g  c  -    gcGAG 
                                          ugaggcu                           gu ac agug     U
                                          |||||||                           || || ||||      
                                          acucuga                           CA UG UCAC     A
-------------------------------------uauuu       auauacaaugaugaaauuauauacguA  A  A    AUACA 

Annotation confidence Not enough data

Genome context

3: 53829174-53829293 [+]

Mature bdi-miR1139

• Accession: MIMAT0012177
• Description: Brachypodium distachyon bdi-miR1139 mature miRNA
• Sequence: 62 - GAGUAACAUACACUAGUAACA - 82
• Evidence: not_experimental

References

1. PubMed ID: 19585143
   Conserved microRNAs and their targets in model grass species Brachypodium distachyon
   "Unver T, Budak H"
   "Planta (2009) 230:659-669