miRBase entry: bta-mir-2475

Stem-loop bta-mir-2475


Accession
MI0011536
Description
Bos taurus bta-mir-2475 precursor miRNA


Sequence

67 reads, 8 reads per million, 13 experiments
uguuucucuucagguuugccacuucacagagaguuuguguugcuUGAAGUGUGUGAAACUGCAGCGGugca
(((.((.((.(((..(((((((((((.((.((.......)).))))))))).))))..))).)).)).)))

Structure
   u  u  u   gu    -       c  a  gu 
ugu uc cu cag  uugc cacuuca ag ga  u
||| || || |||  |||| ||||||| || ||  u
acg GG GA GUC  AGUG GUGAAGU uc uu  g
   u  C  C   AA    U       -  g  gu 


Annotation confidence Not enough data
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Genome context
chr8: 83482947-83483017 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from bta-mir-2475
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-2475

Accession MIMAT0012066
Description Bos taurus bta-miR-2475 mature miRNA
Sequence 45 - UGAAGUGUGUGAAACUGCAGCGG - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349