Stem-loop bta-mir-2450b

Accession

MI0011505

Description

Bos taurus bta-mir-2450b precursor miRNA

Gene family

MIPF0000758; mir-2450

Literature search

1 open access papers mention bta-mir-2450b
(1 sentences)

Sequence

14 reads, 3 reads per million, 3 experiments

agaggcgcgugugccuuuucugcacacuugguauagacucgcacaCAUGGUCAGUAGAGGUGCAUGUGccuuu
.(((((((((((((((((.(((..((..((((........)).))..))..))).))))))))))))))))).

Structure

a                 u   ca  cu  -  aua 
 gaggcgcgugugccuuu cug  ca  ug gu   g
 ||||||||||||||||| |||  ||  || ||    
 uuccGUGUACGUGGAGA GAC  GU  ac cg   a
u                 U   UG  AC  a  cuc 

Annotation confidence Not enough data

Genome context

chr6: 108173861-108173933 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from bta-mir-2450b

Mature bta-miR-2450b

• Accession: MIMAT0012029
• Description: Bos taurus bta-miR-2450b mature miRNA
• Sequence: 46 - CAUGGUCAGUAGAGGUGCAUGUG - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349