Stem-loop bta-mir-2443

Accession

MI0011496

Description

Bos taurus bta-mir-2443 precursor miRNA

Literature search

1 open access papers mention bta-mir-2443
(1 sentences)

Sequence

1348 reads, 63 reads per million, 27 experiments

gugaggguUGAGGGCAGGACCGUAUGAGGUGUccaaggaaggcuccacucagccggcccuucccuccccucac
(((((((..(((((.(((.(((..((((..(.((......))..)..))))..))).))).))))))))))))

Structure

       uU     C   A   UA    GU -U  aa 
gugaggg  GAGGG AGG CCG  UGAG  G  cc  g
|||||||  ||||| ||| |||  ||||  |  ||   
cacuccc  cuccc ucc ggc  acuc  c  gg  g
       --     u   c   cg    ac uc  aa 

Annotation confidence Not enough data

Genome context

chr5: 117458061-117458133 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from bta-mir-2443

Mature bta-miR-2443

• Accession: MIMAT0012018
• Description: Bos taurus bta-miR-2443 mature miRNA
• Sequence: 9 - UGAGGGCAGGACCGUAUGAGGUGU - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349