miRBase entry: bta-mir-2440

Stem-loop bta-mir-2440


Accession
MI0011493
Description
Bos taurus bta-mir-2440 precursor miRNA


Sequence

247 reads, 14 reads per million, 60 experiments
uccagcugugguggggacuguuuggugcgggguggggccagcugUGCAGUGAUGAGACCCUGGAaugagcgcuggg
.(((((..(.((((((.((..(((.((((.(((.......))).)))).)))..)).))))...)).)..))))).

Structure
u     ug g  ---    a  gu   g    g   gg 
 ccagc  u gu   gggg cu  uug ugcg ggu  g
 |||||  | ||   |||| ||  ||| |||| |||  g
 ggucg  a ua   UCCC GA  AGU ACGU ucg  c
g     cg g  AGG    A  GU   G    g   ac 


Annotation confidence Not enough data
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Genome context
chr5: 111571292-111571367 [-]

Database links

Mature bta-miR-2440

Accession MIMAT0012015
Description Bos taurus bta-miR-2440 mature miRNA
Sequence 45 - UGCAGUGAUGAGACCCUGGA - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349