miRBase entry: bta-mir-2428

Stem-loop bta-mir-2428


Accession
MI0011478
Description
Bos taurus bta-mir-2428 precursor miRNA

Literature search
1 open access papers mention bta-mir-2428
(1 sentences)

Sequence

12 reads, 3 reads per million, 7 experiments
gcccaacaUGGCUGGAGUGCGGCGGAGGUgagccgaccgcccccugcagcuccagccuccugagc
((.((....(((((((((((((.((.((((.......))))))))))).))))))))...)).))

Structure
  c  acaU        -     C  A    ag 
gc ca    GGCUGGAG UGCGG GG GGUg  c
|| ||    |||||||| ||||| || ||||  c
cg gu    ccgaccuc acguc cc ccgc  g
  a  -ccu        g     -  -    ca 


Annotation confidence Not enough data
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Genome context
chr5: 42062305-42062369 [+]

Database links

Mature bta-miR-2428

Accession MIMAT0011998
Description Bos taurus bta-miR-2428 mature miRNA
Sequence 9 - UGGCUGGAGUGCGGCGGAGGU - 29
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349