miRBase entry: bta-mir-2422

Stem-loop bta-mir-2422


Accession
MI0011470
Description
Bos taurus bta-mir-2422 precursor miRNA

Literature search
1 open access papers mention bta-mir-2422
(1 sentences)

Sequence

394 reads, 39 reads per million, 29 experiments
uccUUGAGGGGACUGAGGUGCGGAGacgcacagaucauugauccuccgcuucccacgucuccucagga
..(((((((((((((.((.((((((.......((((...))))))))))..)))).))))))))))).

Structure
uc           -  A  -U      acgcaca    a 
  cUUGAGGGGAC UG GG  GCGGAG       gauc  
  ||||||||||| || ||  ||||||       |||| u
  ggacuccucug ac cc  cgccuc       cuag  
-a           c  -  uu      -------    u 


Annotation confidence Not enough data
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Genome context
chr4: 93932865-93932932 [+]

Database links

Mature bta-miR-2422

Accession MIMAT0011989
Description Bos taurus bta-miR-2422 mature miRNA
Sequence 4 - UUGAGGGGACUGAGGUGCGGAG - 25
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349

  2. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026