miRBase entry: bta-mir-2419

Stem-loop bta-mir-2419


Accession
MI0011467
Description
Bos taurus bta-mir-2419 precursor miRNA

Literature search
1 open access papers mention bta-mir-2419
(2 sentences)

Sequence

2773 reads, 86 reads per million, 74 experiments
ccucuaugAUCGCAUCAACACUCGUCUGUUcuuaaauaacauugagaaCAGGCGGGUGCUAAUACGAUCAuagagg
((((((((((((......(((((((((((((((((......)))))))))))))))))......))))))))))))

Structure
            CAUCAA                 au 
ccucuaugAUCG      CACUCGUCUGUUcuuaa  a
||||||||||||      |||||||||||||||||   
ggagauACUAGC      GUGGGCGGACaagaguu  a
            AUAAUC                 ac 


Annotation confidence Not enough data
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Genome context
chr4: 66580841-66580916 [-]

Database links

Mature bta-miR-2419-5p

Accession MIMAT0011985
Description Bos taurus bta-miR-2419-5p mature miRNA
Sequence 9 - AUCGCAUCAACACUCGUCUGUU - 30
Evidence experimental
Illumina [1-2]

Mature bta-miR-2419-3p

Accession MIMAT0011986
Description Bos taurus bta-miR-2419-3p mature miRNA
Sequence 49 - CAGGCGGGUGCUAAUACGAUCA - 70
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349

  2. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026