miRBase entry: bta-mir-2415

Stem-loop bta-mir-2415


Accession
MI0011461
Description
Bos taurus bta-mir-2415 precursor miRNA


Sequence

43 reads, 5 reads per million, 26 experiments
GGGAGUCGGUCCUGCCGGCCAggccugcuggacacuccugccggCCAGGCCUGCUGGACCGACGCcc
(((.((((((((.((.((((.((((.((.(((...))).)).)))).)))).)).)))))))).)))

Structure
   A        U  C    A    u  u   c 
GGG GUCGGUCC GC GGCC ggcc gc gga  
||| |||||||| || |||| |||| || ||| a
ccC CAGCCAGG CG CCGG CCgg cg ccu  
   G        U  U    A    c  u   c 


Annotation confidence Not enough data
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Genome context
chr3: 103277273-103277339 [+]

Database links

Mature bta-miR-2415-5p

Accession MIMAT0011978
Description Bos taurus bta-miR-2415-5p mature miRNA
Sequence 1 - GGGAGUCGGUCCUGCCGGCCA - 21
Evidence experimental
Illumina [1]

Mature bta-miR-2415-3p

Accession MIMAT0011979
Description Bos taurus bta-miR-2415-3p mature miRNA
Sequence 45 - CCAGGCCUGCUGGACCGACGC - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349