Stem-loop sequence bta-mir-2411

AccessionMI0011456 (change log)
DescriptionBos taurus miR-2411 stem-loop
Gene family MIPF0001571; mir-2411
Literature search

3 open access papers mention bta-mir-2411
(7 sentences)

Stem-loop 
        aa  u       cu u   aug       - agaa 
5' gagga  ug ggaguga  g cag   cagccag c    u
   |||||  || |||||||  | |||   ||||||| |     
3' cuccu  ac ccucauu  c guc   gucgguu g    a
        ac  -       -- u   -aa       u guga
Get sequence
Deep sequencing
327 reads, 4.62 reads per million, 65 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr3: 16484204-16484280 [-]
sense
ENSBTAT00000060582 ; SNORA58-201; exon 1
ENSBTAT00000052306 ; UBAP2L-201; intron 15
ENSBTAT00000005611 ; UBAP2L-202; intron 15
Database links

Mature sequence bta-miR-2411-5p

Accession MIMAT0011972
Previous IDsbta-miR-2411
Sequence

10 -  

uggagugacugucagaugcagcca

 - 33

Get sequence
Deep sequencing159 reads, 54 experiments
Evidence experimental; Illumina [1-2]
Predicted targets

Mature sequence bta-miR-2411-3p

Accession MIMAT0011973
Previous IDsbta-miR-2411*
Sequence

51 -  

gcugaacugucuuacucccacaucc

 - 75

Get sequence
Deep sequencing162 reads, 53 experiments
Evidence experimental; Illumina [1-2]
Predicted targets

References

1
PMID:19633723 "Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection" Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ PLoS One. 4:e6349(2009).
2
PMID:21912509 "Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle" Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J Int J Biol Sci. 7:1016-1026(2011).