Stem-loop sequence bta-mir-449d

AccessionMI0011447 (change log)
DescriptionBos taurus miR-449d stem-loop
Literature search

6 open access papers mention bta-mir-449d
(13 sentences)

Stem-loop 
   u  ccu     u    aag -  -g  u   gu     g 
5'  gu   gucca gucg   g cu  ug gcu  ggagg g
    ||   ||||| ||||   | ||  || |||  |||||  
3'  cg   cgggu cagc   c ga  gc cgg  cuucc a
   a  --u     c    aca a  ga  -   gu     g
Get sequence
Deep sequencing
18 reads, 0 reads per million, 4 experiments
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr29: 25365714-25365788 [-]
sense
ENSBTAT00000024536 ; NAV2-201; intron 10
Database links

Mature sequence bta-miR-449d

Accession MIMAT0011962
Sequence

16 -  

gaaggcugugugcuguggag

 - 35

Get sequence
Deep sequencing18 reads, 5 experiments
Evidence experimental; Illumina [1]
Predicted targets

References

1
PMID:19633723 "Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection" Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ PLoS One. 4:e6349(2009).