miRBase entry: bta-mir-2399

Stem-loop bta-mir-2399


Accession
MI0011440
Description
Bos taurus bta-mir-2399 precursor miRNA

Literature search
2 open access papers mention bta-mir-2399
(2 sentences)

Sequence

77 reads, 9 reads per million, 46 experiments
guaauccucacaCUUUCUGUAGCUGUUGGAACUAuggugcauuguggUUCUAACAACUACAGAAAGUGUgaaaaucac
.......(((((((((((((((.((((((((((((........)))))))))))).))))))))))))))).......

Structure
guaaucc               C            ggu 
       ucacaCUUUCUGUAG UGUUGGAACUAu   g
       ||||||||||||||| ||||||||||||    
       agUGUGAAAGACAUC ACAAUCUUggug   c
cacuaaa               A            uua 


Annotation confidence Not enough data
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Genome context
chr27: 25852073-25852150 [+]

Database links

Mature bta-miR-2399-5p

Accession MIMAT0011954
Description Bos taurus bta-miR-2399-5p mature miRNA
Sequence 13 - CUUUCUGUAGCUGUUGGAACUA - 34
Evidence experimental
Illumina [1]

Mature bta-miR-2399-3p

Accession MIMAT0011955
Description Bos taurus bta-miR-2399-3p mature miRNA
Sequence 48 - UUCUAACAACUACAGAAAGUGU - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349