Stem-loop sequence bta-mir-2389

AccessionMI0011429 (change log)
DescriptionBos taurus miR-2389 stem-loop
Literature search

2 open access papers mention bta-mir-2389
(3 sentences)

Stem-loop 
      ccc      g  cga      u   ga     -a  -  a 
5' gcg   gggcgg gc   ggggac cgg  gucgg  gc gg g
   |||   |||||| ||   |||||| |||  |||||  || ||  
3' cgc   cucgcc cg   ccccug gcc  cggcc  cg cc a
      -cc      g  ---      c   gc     cc  a  a
Get sequence
Deep sequencing
559 reads, 0 reads per million, 48 experiments
Confidence Annotation confidence: not enough data
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr25: 42477902-42477983 [+]
sense
ENSBTAT00000043431 ; C25H7ORF50-201; intron 1
antisense
ENSBTAT00000064866 ; GPR146-201; intron 1
Database links

Mature sequence bta-miR-2389

Accession MIMAT0011942
Sequence

17 -  

gaggggacucgggagucggag

 - 37

Get sequence
Deep sequencing95 reads, 19 experiments
Evidence experimental; Illumina [1]
Predicted targets

References

1
PMID:19633723 "Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection" Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ PLoS One. 4:e6349(2009).