miRBase entry: bta-mir-2389

Stem-loop bta-mir-2389


Accession
MI0011429
Description
Bos taurus bta-mir-2389 precursor miRNA

Literature search
2 open access papers mention bta-mir-2389
(3 sentences)

Sequence

79 reads, 11 reads per million, 10 experiments
gcgcccgggcggggccGAGGGGACUCGGGAGUCGGAGcggagaaccagcccccggccgccgcguccccgcgccgcuccccgc
(((...((((((.((...((((((.(((..(((((.((((....)).))..)))))..))).)))))))).))))))..)))

Structure
   ccc      g  cGA      U   GA     -A  -  a 
gcg   gggcgg gc   GGGGAC CGG  GUCGG  Gc gg g
|||   |||||| ||   |||||| |||  |||||  || ||  
cgc   cucgcc cg   ccccug gcc  cggcc  cg cc a
   -cc      g  ---      c   gc     cc  a  a 


Annotation confidence Not enough data
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Genome context
chr25: 42477902-42477983 [+]

Database links

Mature bta-miR-2389

Accession MIMAT0011942
Description Bos taurus bta-miR-2389 mature miRNA
Sequence 17 - GAGGGGACUCGGGAGUCGGAG - 37
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349