miRBase entry: bta-mir-2377

Stem-loop bta-mir-2377


Accession
MI0011412
Description
Bos taurus bta-mir-2377 precursor miRNA


Sequence

8 reads, 2 reads per million, 5 experiments
gacuuagaccacacggggagagcagaguccagagcacaugggccACUGCACAGACCUAGGCUCUgaguc
((((((((((....(((....((((.(((((.......)))))..)))).....))).)).))))))))

Structure
        -  acac   -gaga    -a     ga 
gacuuaga cc    ggg     gcag  gucca  g
|||||||| ||    |||     ||||  |||||  c
cugagUCU GG    UCC     CGUC  cgggu  a
        C  ---A   AGACA    Ac     ac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr23: 13119948-13120016 [-]

Database links

Mature bta-miR-2377

Accession MIMAT0011923
Description Bos taurus bta-miR-2377 mature miRNA
Sequence 45 - ACUGCACAGACCUAGGCUCU - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349