miRBase entry: bta-mir-2284k

Stem-loop bta-mir-2284k


Accession
MI0011400
Description
Bos taurus bta-mir-2284k precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
13 open access papers mention bta-mir-2284k
(32 sentences)

Sequence

25 reads, 5 reads per million, 12 experiments
aguugaccaGAAAAGUUCGGUCGGGUUUUUcugcaacaucuaaugaaaaaaccaaaagaacuuuuuggccaccu
((.((.(((((((.((((....((..(((((.............)))))..))....))))))))))).)).))

Structure
  u  a       A    GGUC  GU     ugcaa 
ag ug ccaGAAA GUUC    GG  UUUUc     c
|| || ||||||| ||||    ||  |||||     a
uc ac gguuuuu caag    cc  aaaag     u
  c  c       -    aaaa  aa     uaauc 


Annotation confidence Not enough data
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Genome context
chr21: 70380569-70380642 [-]

Database links

Mature bta-miR-2284k

Accession MIMAT0011907
Description Bos taurus bta-miR-2284k mature miRNA
Sequence 10 - GAAAAGUUCGGUCGGGUUUUU - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349