miRBase entry: bta-mir-2343

Stem-loop bta-mir-2343


Accession
MI0011371
Description
Bos taurus bta-mir-2343 precursor miRNA


Sequence

5 reads, 1 reads per million, 3 experiments
cugacaagggAAGGGGAGACGGUGGAACUUAUccagaguguguguaguugaggugacacuguccccaccuccag
........(((.((((.(((((((..((((((.((.....)).))).....)))..)))))))))).).)))..

Structure
cugacaag   A -   A       GA   -----   c  g 
        ggA G GGG GACGGUG  ACU     UAU ca a
        ||| | ||| |||||||  |||     ||| || g
        ccu c ccc cugucac  ugg     aug gu u
------ga   c a   -       ag   aguug   u  g 


Annotation confidence Not enough data
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Genome context
chr19: 45394335-45394408 [-]

Database links

Mature bta-miR-2343

Accession MIMAT0011878
Description Bos taurus bta-miR-2343 mature miRNA
Sequence 11 - AAGGGGAGACGGUGGAACUUAU - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349