miRBase entry: bta-mir-2342

Stem-loop bta-mir-2342


Accession
MI0011370
Description
Bos taurus bta-mir-2342 precursor miRNA


Sequence

12 reads, 4 reads per million, 12 experiments
ggagcuaggcguggagcuucuguagugguaguguuccacacCUCUGCGGAAGUUGGCGCUUUcgauuuggcuuu
.(((((((((((..(((((((((((.(((.(((...)))))).))))))))))).))))).......)))))).

Structure
g      -------     gg           u   a   u 
 gagcua       ggcgu  agcuucuguag ggu gug  
 ||||||       |||||  ||||||||||| ||| ||| u
 uucggu       UCGCG  UUGAAGGCGUC Cca cac  
u      uuagcUU     -G           U   -   c 


Annotation confidence Not enough data
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Genome context
chr19: 40692256-40692329 [+]

Database links

Mature bta-miR-2342

Accession MIMAT0011877
Description Bos taurus bta-miR-2342 mature miRNA
Sequence 42 - CUCUGCGGAAGUUGGCGCUUU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349