miRBase entry: bta-mir-2333

Stem-loop bta-mir-2333


Accession
MI0011359
Description
Bos taurus bta-mir-2333 precursor miRNA


Sequence

4 reads, 1 reads per million, 3 experiments
uuaGCAAUGCAGACUCCAGGGCCCuuugguugagcuccggggcccgagagucagcauuguuaa
.(((((((((.(((((..(((((((..(((...)))..)))))))..))))).))))))))).

Structure
u         A     CA       uu   u 
 uaGCAAUGC GACUC  GGGCCCu  ggu  
 ||||||||| |||||  |||||||  ||| g
 auuguuacg cugag  cccgggg  ucg  
a         a     ag       cc   a 


Annotation confidence Not enough data
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Genome context
chr19: 18920681-18920743 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-2333
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-2333

Accession MIMAT0011866
Description Bos taurus bta-miR-2333 mature miRNA
Sequence 4 - GCAAUGCAGACUCCAGGGCCC - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349