miRBase entry: bta-mir-2319a

Stem-loop bta-mir-2319a


Accession
MI0011340
Description
Bos taurus bta-mir-2319a precursor miRNA
Gene family
MIPF0000790; mir-2319

Literature search
1 open access papers mention bta-mir-2319a
(1 sentences)

Sequence

25 reads, 4 reads per million, 17 experiments
uauguagcuaagugccuaauacagaguaacaucuuaugaucucaugCUACUCUGUAUUAGGCACUUAGcuacaua
((((((((((((((((((((((((((((.(((...........))).))))))))))))))))))))))))))))

Structure
                            a   cuua 
uauguagcuaagugccuaauacagagua cau    u
|||||||||||||||||||||||||||| |||    g
auacaucGAUUCACGGAUUAUGUCUCAU gua    a
                            C   cucu 


Annotation confidence Not enough data
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Genome context
chr15: 78018299-78018373 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-2319a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-2319a

Accession MIMAT0011842
Description Bos taurus bta-miR-2319a mature miRNA
Sequence 47 - CUACUCUGUAUUAGGCACUUAG - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349