miRBase entry: bta-mir-2285b-1

Stem-loop bta-mir-2285b-1


Accession
MI0011332
Description
Bos taurus bta-mir-2285b-1 precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
11 open access papers mention bta-mir-2285b-1
(15 sentences)

Sequence

216 reads, 18 reads per million, 54 experiments
guuggccgaaaaguucauuccaguuuuucuguacuaccuuaugggAAAAUCUGAGUGAACUUUUUGGcuaac
((((((((((((((((((((..(((((((((((......)))))))))))..))))))))))))))))))))

Structure
                    ca           cu 
guuggccgaaaaguucauuc  guuuuucugua  a
||||||||||||||||||||  |||||||||||   
caaucGGUUUUUCAAGUGAG  UAAAAggguau  c
                    UC           uc 


Annotation confidence Not enough data
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Genome context
chr15: 39785119-39785190 [-]

Database links

Mature bta-miR-2285b

Accession MIMAT0011833
Description Bos taurus bta-miR-2285b mature miRNA
Sequence 46 - AAAAUCUGAGUGAACUUUUUGG - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349

  2. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026