Stem-loop sequence bta-mir-2284t

AccessionMI0011331 (change log)
DescriptionBos taurus miR-2284t stem-loop
Gene family MIPF0000747; mir-2284
Literature search

13 open access papers mention bta-mir-2284t
(32 sentences)

Stem-loop 
                    c           cauagc 
5' guuggccgaaacauuca ucggguuuuuc      a
   ||||||||||||||||| |||||||||||      u
3' caaccgguuuuguaagu agcucaaaaag      c
                    a           acaauu
Get sequence
Deep sequencing
155 reads, 0 reads per million, 51 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr15: 39355496-39355568 [-]
sense
ENSBTAT00000012059 ; SPON1-201; intron 5
Database links

Mature sequence bta-miR-2284t-5p

Accession MIMAT0011831
Previous IDsbta-miR-2284t*
Sequence

8 -  

gaaacauucacucggguuuuu

 - 28

Get sequence
Deep sequencing25 reads, 11 experiments
Evidence experimental; Illumina [1-2]
Predicted targets

Mature sequence bta-miR-2284t-3p

Accession MIMAT0011832
Previous IDsbta-miR-2284t
Sequence

48 -  

aaacucgaaugaauguuuuggc

 - 69

Get sequence
Deep sequencing130 reads, 51 experiments
Evidence experimental; Illumina [1-2]
Predicted targets

References

1
PMID:19633723 "Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection" Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ PLoS One. 4:e6349(2009).
2
PMID:21912509 "Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle" Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J Int J Biol Sci. 7:1016-1026(2011).