miRBase entry: bta-mir-2299

Stem-loop bta-mir-2299


Accession
MI0011309
Description
Bos taurus bta-mir-2299 precursor miRNA

Literature search
2 open access papers mention bta-mir-2299
(6 sentences)

Sequence

747 reads, 24 reads per million, 68 experiments
uaacugaacacACUGGAUUCAUUUCUCUGAAAguggauuuuguggucugUCCGGGGAAUGGAUCCAGCGUgaucgguug
(((((((.(((.(((((((((((((((.((...((((((....)))))))).))))))))))))))).))).)))))))

Structure
       a   A               U  AAg      u 
uaacuga cac CUGGAUUCAUUUCUC GA   uggauu u
||||||| ||| ||||||||||||||| ||   ||||||  
guuggcu gUG GACCUAGGUAAGGGG CU   gucugg g
       a   C               C  ---      u 


Annotation confidence High
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Genome context
chr12: 29753514-29753592 [-]

Database links

Mature bta-miR-2299-5p

Accession MIMAT0011807
Description Bos taurus bta-miR-2299-5p mature miRNA
Sequence 12 - ACUGGAUUCAUUUCUCUGAAA - 32
Evidence experimental
Illumina [1-2]

Mature bta-miR-2299-3p

Accession MIMAT0011808
Description Bos taurus bta-miR-2299-3p mature miRNA
Sequence 50 - UCCGGGGAAUGGAUCCAGCGU - 70
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349

  2. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026