Accession
MI0011280
Description
Zea mays
zma-MIR2275c precursor miRNA
Literature search
10 open access papers mention zma-MIR2275c
(16 sentences)
(16 sentences)
Sequence
5
reads,
328
reads per million, 2 experiments
agagagauguugauaugugucauuugaagugAGGAUUAGAGGGACUUGAACCauucauagcuuguucgguuaugucuggaucgaagaggguuggaagguccuuucuaguuaaaauuaaauagaaagagauugaaucccuuuaaccuccuauccagaugugaccaaacaaacucucauugggaguaaaaggggUUCAGUUUCCUCUAAUAUCUCAucuuaaauggcccaucaucuccu
((.((((((.....(((.(((((((((.((((((((((((((((.(((((((.........(((((.((((((((((((((...((.((((((((.(((((((((((.(((....))).))))))).))......)).)))))))).)))))))))))))))).)))))((((((...))))))......))))))).)))))))))).)))))).))))))))).)))))))))))
((.((((((.....(((.(((((((((.((((((((((((((((.(((((((.........(((((.((((((((((((((...((.((((((((.(((((((((((.(((....))).))))))).))......)).)))))))).)))))))))))))))).)))))((((((...))))))......))))))).)))))))))).)))))).))))))))).)))))))))))
Structure
a uugau u a - C ------------auucauagc c cga a a ------ - g a ag gagaug aug gucauuuga gugAGG AUUAGAGGGA UUGAACC uuguu gguuaugucuggau ag ggguugga gg uc cuuucua uua a || |||||| ||| ||||||||| |||||| |||||||||| ||||||| ||||| |||||||||||||| || |||||||| || || ||||||| ||| uc cucuac uac cgguaaauu uACUCU UAAUCUCCUU GACUUgg aacaa ccaguguagaccua uc uccaauuu cc ag gaaagau aau a - ----- c c A U ggaaaaugaggguuacucuca a --- c c uaaguu a a u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
chr10: 70573557-70573793 [+]
Database links
Mature zma-miR2275c-5p
| Accession | MIMAT0011771 |
| Description | Zea mays zma-miR2275c-5p mature miRNA |
| Sequence | 32 - AGGAUUAGAGGGACUUGAACC - 52 |
| Evidence | not_experimental |
Mature zma-miR2275c-3p
| Accession | MIMAT0011772 |
| Description | Zea mays zma-miR2275c-3p mature miRNA |
| Sequence | 193 - UUCAGUUUCCUCUAAUAUCUCA - 214 |
| Evidence |
experimental
454 [1] |
References
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