Stem-loop cel-mir-2218b

Accession

MI0010971

Description

Caenorhabditis elegans cel-mir-2218b precursor miRNA

Sequence

56 reads, 1 reads per million, 9 experiments

AGACUACAAACUACAUCAUUUUCcaucucuuuggugaggcuagaAAAUUUGUAGUUUGUAGUGAGA
..(((((((((((((..((((((..((((......))))...)))))).)))))))))))))....

Structure

--AG             UC      -ca    uu 
    ACUACAAACUACA  AUUUUC   ucuc  u
    |||||||||||||  ||||||   ||||   
    UGAUGUUUGAUGU  UAAAag   ggag  g
AGAG             -U      auc    ug 

Annotation confidence Not enough data

Genome context

chrI: 13834876-13834941 [-]

Mature cel-miR-2218b-5p

• Accession: MIMAT0011457
• Description: Caenorhabditis elegans cel-miR-2218b-5p mature miRNA
• Sequence: 1 - AGACUACAAACUACAUCAUUUUC - 23
• Evidence: experimental ; Illumina [1]

Mature cel-miR-2218b-3p

• Accession: MIMAT0011458
• Description: Caenorhabditis elegans cel-miR-2218b-3p mature miRNA
• Sequence: 45 - AAAUUUGUAGUUUGUAGUGAGA - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19460142
   Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans development
   Kato M, de Lencastre A, Pincus Z, Slack FJ
   Genome Biol (2009) 10:R54