miRBase entry: cel-mir-2217a

Stem-loop cel-mir-2217a


Accession
MI0010968
Description
Caenorhabditis elegans cel-mir-2217a precursor miRNA
Gene family
MIPF0001912; mir-2217


Sequence

125 reads, 4 reads per million, 11 experiments
CAGAGUGGGCAGUCGGUGUCGAUCuacaucauucgcaggUCGACCCUUGUGCCUGUUUCGGU
..(((.(((((...((.((((((((.(.......).))))))))))...)))))..)))...

Structure
-CA   -U     GUC  U        a au 
   GAG  GGGCA   GG GUCGAUCu c  c
   |||  |||||   || |||||||| |  a
   CUU  UCCGU   CC CAGCUgga g  u
UGG   UG     GUU  -        c cu 


Annotation confidence Not enough data
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Genome context
chrIV: 5280075-5280136 [-]

Database links

Mature cel-miR-2217a-5p

Accession MIMAT0011451
Description Caenorhabditis elegans cel-miR-2217a-5p mature miRNA
Sequence 1 - CAGAGUGGGCAGUCGGUGUCGAUC - 24
Evidence experimental
Illumina [1]

Mature cel-miR-2217a-3p

Accession MIMAT0011452
Description Caenorhabditis elegans cel-miR-2217a-3p mature miRNA
Sequence 40 - UCGACCCUUGUGCCUGUUUCGGU - 62
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 19460142
    Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans development
    Kato M, de Lencastre A, Pincus Z, Slack FJ
    Genome Biol (2009) 10:R54