miRBase entry: cel-mir-2216

Stem-loop cel-mir-2216


Accession
MI0010966
Description
Caenorhabditis elegans cel-mir-2216 precursor miRNA


Sequence

72 reads, 3 reads per million, 11 experiments
GCACAUUUUAAGUCGGUAGGCguccaauuuugaugcCUAUCUACUUAAAAUGUGCCU
(((((((((((((.((((((((((.......)))))))))).)))))))))))))..

Structure
--             C          ca 
  GCACAUUUUAAGU GGUAGGCguc  a
  ||||||||||||| ||||||||||  u
  CGUGUAAAAUUCA CUAUCcguag  u
UC             U          uu 


Annotation confidence Not enough data
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Genome context
chrII: 10867116-10867172 [-]

Database links

Mature cel-miR-2216-5p

Accession MIMAT0011447
Description Caenorhabditis elegans cel-miR-2216-5p mature miRNA
Sequence 1 - GCACAUUUUAAGUCGGUAGGC - 21
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature cel-miR-2216-3p

Accession MIMAT0011448
Description Caenorhabditis elegans cel-miR-2216-3p mature miRNA
Sequence 37 - CUAUCUACUUAAAAUGUGCCU - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19460142
    Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans development
    Kato M, de Lencastre A, Pincus Z, Slack FJ
    Genome Biol (2009) 10:R54