miRBase entry: sbi-MIR529

Stem-loop sbi-MIR529


Accession
MI0010924
Description
Sorghum bicolor sbi-MIR529 precursor miRNA
Gene family
MIPF0000388; MIR529

Literature search
2 open access papers mention sbi-MIR529
(9 sentences)

Sequence

gggagaagagagagaguacagccuuaccauguacacacacuccaaucucaacagucucuuauauaugcugcuguuaccugugagugugaugaaggCUGUACCCUCUCUCUUCUUCu
((((((((((((((.((((((((((..(((.....(((((((((.....((((((..(........)..))))))...)).)))))))))))))))))))).))))))))))))))

Structure
              a          ac   guaca       -  aucuc      cu uua 
gggagaagagagag guacagccuu  cau     cacacuc ca     aacagu  c   u
|||||||||||||| ||||||||||  |||     ||||||| ||     ||||||  |    
uCUUCUUCUCUCUC CAUGUCggaa  gua     gugugag gu     uugucg  g   a
              C          --   -----       u  --cca      uc uau 


Annotation confidence Not enough data
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Genome context
chr4: 44685716-44685831 [+]

Database links

Mature sbi-miR529

Accession MIMAT0011384
Description Sorghum bicolor sbi-miR529 mature miRNA
Sequence 96 - CUGUACCCUCUCUCUUCUUC - 115
Evidence not_experimental

References

  1. PubMed ID: 19936050
    A genome-wide characterization of microRNA genes in maize
    Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
    PLoS Genet (2009) 5:e1000716