miRBase entry: sbi-MIR437u

Stem-loop sbi-MIR437u


Accession
MI0010921
Description
Sorghum bicolor sbi-MIR437u precursor miRNA
Gene family
MIPF0000746; MIR437

Literature search
3 open access papers mention sbi-MIR437u
(5 sentences)

Sequence

uuaaaccucuaacugugacugauuuuuuuggaaaaauauauuaacaucugcaagcugaaauaagugcacuaucaagacauggagaauuuaaugaaacuaauuugaugucauagauauuggcguauuuuucuauaaacuuggugAAAGUUAGAGAAGUUUGACUU
((((((((((((((.(.(((((.(((..(((((((((((.((((.((((((..(((......)))))........(((((.((..................)).)))))..)))).)))).))))))))))).))).))))).).))))))))..))))))...

Structure
---      --        g g     u   uu           a    c    gcaagcugaaauaagugcacuaucaa     g  gaauuuaa 
   uuaaac  cucuaacu u acuga uuu  uggaaaaauau uuaa aucu                          gacau ga        u
   ||||||  |||||||| | ||||| |||  ||||||||||| |||| ||||                          ||||| ||         
   AGUUUG  GAGAUUGA A ugguu aaa  aucuuuuuaug gguu uaga                          cugua uu        g
UUC      AA        A g     c   -u           c    a    ------------------------ua     g  uaaucaaa 


Annotation confidence Not enough data
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Genome context
chr9: 52942441-52942604 [+]

Database links

Mature sbi-miR437u

Accession MIMAT0011381
Description Sorghum bicolor sbi-miR437u mature miRNA
Sequence 144 - AAAGUUAGAGAAGUUUGACUU - 164
Evidence not_experimental

References

  1. PubMed ID: 19189423
    The Sorghum bicolor genome and the diversification of grasses
    "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
    "Nature (2009) 457:551-556