miRBase entry: sbi-MIR437k

Stem-loop sbi-MIR437k


Accession
MI0010911
Description
Sorghum bicolor sbi-MIR437k precursor miRNA
Gene family
MIPF0000746; MIR437

Literature search
3 open access papers mention sbi-MIR437k
(5 sentences)

Sequence

augucaaacuucucuaacuuugaccaaacuuauagaaaaauacaccaacaauaacaucagcuaguuugauuaauucuccauaaaauaugucuuauuagugcauuuauuugaauuuguagaaguugacauauuuuucuaaaaacuuggucAAAGUUAGAGAAGUUUGACUUag
..(((((((((((((((((((((((((..((.((((((((((...((((....(((((((.(((....((((((....((((...))))....))))))....))).))))...)))....))))...)))))))))).))..)))))))))))))))))))))))))....

Structure
--au                         ac  a          cac    aaua   ---    c   uuug      ucuc    a 
    gucaaacuucucuaacuuugaccaa  uu uagaaaaaua   caac    aca   ucag uag    auuaau    caua  
    |||||||||||||||||||||||||  || ||||||||||   ||||    |||   |||| |||    ||||||    |||| a
    CAGUUUGAAGAGAUUGAAAcugguu  aa aucuuuuuau   guug    ugu   aguu auu    ugauua    guau  
gaUU                         ca  a          aca    aaga   uua    u   uacg      uucu    a 


Annotation confidence Not enough data
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Genome context
chr1: 9804351-9804522 [-]

Database links

Mature sbi-miR437k

Accession MIMAT0011371
Description Sorghum bicolor sbi-miR437k mature miRNA
Sequence 150 - AAAGUUAGAGAAGUUUGACUU - 170
Evidence not_experimental

References

  1. PubMed ID: 19189423
    The Sorghum bicolor genome and the diversification of grasses
    "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
    "Nature (2009) 457:551-556