miRBase entry: sbi-MIR437f

Stem-loop sbi-MIR437f


Accession
MI0010907
Description
Sorghum bicolor sbi-MIR437f precursor miRNA
Gene family
MIPF0000746; MIR437

Literature search
3 open access papers mention sbi-MIR437f
(5 sentences)

Sequence

agucaaacuucucuaacuuugaaaaaagucuguagaaaaauauauuaacaucuacaauaccaaauaaaugcacuaucaagacauauuucauguuggauuuaaugaaacuaauuuguuguugaucuuggugcacuuuucuauaaacuuggucAAAGUUAGAGAAGUUUGACUUag
((((((((((((((((((((((...((((.(((((((((...((((((.(((.((((((...............(((..(((((.....))))).)))...............)))))).))).))))))...))))))))).))))..))))))))))))))))))))))...

Structure
---                      aaa    c         aua      c   u      ccaaauaaaugcacu   aa     a 
   agucaaacuucucuaacuuuga   aagu uguagaaaa   uauuaa auc acaaua               auc  gacau u
   ||||||||||||||||||||||   |||| |||||||||   |||||| ||| ||||||               |||  ||||| u
   UCAGUUUGAAGAGAUUGAAAcu   uuca auaucuuuu   gugguu uag uguugu               uag  uugua u
gaU                      -gg    a         cac      c   u      uuaaucaaaguaauu   -g     c 


Annotation confidence Not enough data
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Genome context
chr1: 64048458-64048631 [-]

Database links

Mature sbi-miR437f

Accession MIMAT0011367
Description Sorghum bicolor sbi-miR437f mature miRNA
Sequence 152 - AAAGUUAGAGAAGUUUGACUU - 172
Evidence not_experimental

References

  1. PubMed ID: 19189423
    The Sorghum bicolor genome and the diversification of grasses
    "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
    "Nature (2009) 457:551-556