miRBase entry: pvu-MIR2119

Stem-loop pvu-MIR2119


Accession
MI0010703
Description
Phaseolus vulgaris pvu-MIR2119 precursor miRNA
Gene family
MIPF0000762; MIR2119

Literature search
2 open access papers mention pvu-MIR2119
(4 sentences)

Sequence

aucaauguuguuacuuuuacacuuuauuuucuaugcuuuuccucuacaacucucuuuuauuuuggagaaaugaaguggauuucuacucuuugauuggagaaaaaaaguggauuucuauuuuuuucaaUCAAAGGGAGUUGUAGGGGAA
......................................(((((((((((((((((((....(((((((((....(((((..((((((.(((..........))).))))))..))))))))))))))..)))))))))))))))))))

Structure
aucaauguuguuacuuuuacacuuuauuuucuaugcuu                   uauu         ugaa     uu      c   gauu 
                                      uuccucuacaacucucuuu    uuggagaaa    gugga  ucuacu uuu    g
                                      |||||||||||||||||||    |||||||||    |||||  |||||| |||     
                                      AAGGGGAUGUUGAGGGAAA    aacuuuuuu    uaucu  agguga aaa    g
--------------------------------------                   --CU         ----     uu      a   aaga 


Annotation confidence Not enough data
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Genome context
chr2: 8674179-8674326 [+]

Database links

Mature pvu-miR2119

Accession MIMAT0011174
Description Phaseolus vulgaris pvu-miR2119 mature miRNA
Sequence 128 - UCAAAGGGAGUUGUAGGGGAA - 148
Evidence experimental
cloned [1], Northern [1]

References

  1. PubMed ID: 19353277
    Conserved and novel miRNAs in the legume Phaseolus vulgaris in response to stress
    "Arenas-Huertero C, Perez B, Rabanal F, Blanco-Melo D, De la Rosa C, Estrada-Navarrete G, Sanchez F, Covarrubias AA, Reyes JL"
    "Plant Mol Biol (2009) 70:385-401