miRBase entry: pvu-MIR482

Stem-loop pvu-MIR482


Accession
MI0010702
Description
Phaseolus vulgaris pvu-MIR482 precursor miRNA
Gene family
MIPF0000403; MIR482

Literature search
3 open access papers mention pvu-MIR482
(15 sentences)

Sequence

uugugGGAAUGGGCUGAUUGGGAAGCAaugaaaacucaagcaauugugucuacauuuUCUUCCCAAUUCCGCCCAUUCCuauga
((((((((((((((.((((((((((.((((...((.(((....))).))...))))..))))))))))..))))))))))))))

Structure
              -U          -C    aaa  u   g 
uugugGGAAUGGGC  GAUUGGGAAG  Aaug   ac caa c
||||||||||||||  ||||||||||  ||||   || |||  
aguauCCUUACCCG  UUAACCCUUC  uuac   ug guu a
              CC          Uu    auc  u   a 


Annotation confidence Not enough data
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Genome context
chr8: 862464-862547 [+]

Database links

Mature pvu-miR482-5p

Accession MIMAT0011172
Description Phaseolus vulgaris pvu-miR482-5p mature miRNA
Sequence 6 - GGAAUGGGCUGAUUGGGAAGCA - 27
Evidence experimental
cloned [1], Northern [1]

Mature pvu-miR482-3p

Accession MIMAT0011173
Description Phaseolus vulgaris pvu-miR482-3p mature miRNA
Sequence 58 - UCUUCCCAAUUCCGCCCAUUCC - 79
Evidence experimental
cloned [1], Northern [1]

References

  1. PubMed ID: 19353277
    Conserved and novel miRNAs in the legume Phaseolus vulgaris in response to stress
    "Arenas-Huertero C, Perez B, Rabanal F, Blanco-Melo D, De la Rosa C, Estrada-Navarrete G, Sanchez F, Covarrubias AA, Reyes JL"
    "Plant Mol Biol (2009) 70:385-401