Stem-loop pvu-MIR1514a

Accession

MI0010701

Description

Phaseolus vulgaris pvu-MIR1514a precursor miRNA

Literature search

4 open access papers mention pvu-MIR1514a
(96 sentences)

Sequence

auugaagaacaccuugccuaccuucucacugcauucuuuugaauggaaacagggcuuuccuguuUUCAUUUUGAAAAUAGGCAUUGcauuacauuucgaugcgucuuccaauuccaaugccuauuuuaagaugaaaacaaggauacacuguuuuuguuugaaacuguugugaaggaagauaagacucccgaguucuucaauu
((((((((((.(((((.((.(((..((((.(((...((((((((((((((((.....(((((((((((((((((((.(((((((((((((.......))))).............))))))))))))))))))))))).))))....)))))))))))))))).))).))))))).)).))))......).)))))))))).

Structure

-          a ------    c  a   uc    u   uuc                ggcuu    -               A        -------------     ac 
 auugaagaac c      cuug cu ccu  ucac gca   uuuugaauggaaacag     uccu guuUUCAUUUUGAAA UAGGCAUU             Gcauu  a
 |||||||||| |      |||| || |||  |||| |||   ||||||||||||||||     |||| ||||||||||||||| ||||||||             |||||  u
 uaacuucuug g      gaau ga gga  agug ugu   aaaguuuguuuuuguc     agga caaaaguagaauuuu auccguaa             cguag  u
u          a cccuca    a  a   --    u   --c                -acau    a               -        ccuuaaccuucug     cu 

Annotation confidence Not enough data

Genome context

chr3: 23530620-23530821 [+]

Mature pvu-miR1514a

• Accession: MIMAT0011171
• Description: Phaseolus vulgaris pvu-miR1514a mature miRNA
• Sequence: 65 - UUCAUUUUGAAAAUAGGCAUUG - 86
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19353277
   Conserved and novel miRNAs in the legume Phaseolus vulgaris in response to stress
   "Arenas-Huertero C, Perez B, Rabanal F, Blanco-Melo D, De la Rosa C, Estrada-Navarrete G, Sanchez F, Covarrubias AA, Reyes JL"
   "Plant Mol Biol (2009) 70:385-401