miRBase entry: lmi-mir-9a

Stem-loop lmi-mir-9a


Accession
MI0010645
Description
Locusta migratoria lmi-mir-9a precursor miRNA
Gene family
MIPF0000014; mir-9

Literature search
2 open access papers mention lmi-mir-9a
(2 sentences)

Sequence

UCUUUGGUUAUCUAGCUGUAUGAgugcaugugucugucAUAAAGCUAGGUUACCGAAGUUA
.(((((((.((((((((.(((((..((....))...))))).)))))))).)))))))...

Structure
--U       U        G     -gu  a 
   CUUUGGU AUCUAGCU UAUGA   gc u
   ||||||| |||||||| |||||   ||  
   GAAGCCA UGGAUCGA AUAcu   ug g
AUU       U        A     guc  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature lmi-miR-9a-5p

Accession MIMAT0010146
Description Locusta migratoria lmi-miR-9a-5p mature miRNA
Sequence 1 - UCUUUGGUUAUCUAGCUGUAUGA - 23
Evidence experimental
Illumina [1]

Mature lmi-miR-9a-3p

Accession MIMAT0010147
Description Locusta migratoria lmi-miR-9a-3p mature miRNA
Sequence 39 - AUAAAGCUAGGUUACCGAAGUUA - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19146710
    Characterization and comparative profiling of the small RNA transcriptomes in two phases of locust
    "Wei Y, Chen S, Yang P, Ma Z, Kang L"
    "Genome Biol (2009) 10:R6