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miRBase |
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Stem-loop sequence ath-MIR2111a |
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Accession | MI0010630 (change log) | ||||
Description | Arabidopsis thaliana miR2111a stem-loop | ||||
Gene family | MIPF0000754; MIR2111 | ||||
Literature search |
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4 open access papers mention ath-MIR2111a | ||||
Stem-loop |
ug a --- c u gcuuaauuuacgcaggaaauuuguaua 5' cga aug guauug gugaggac ggguaaucugcauccugagg uuaaa c ||| ||| |||||| |||||||| |||||||||||||||||||| ||||| 3' gcu ugc cauaac cauucuug uccauuaggcguagggcucc gauuu g ca a auu c u uccauaugauuauguguaugcauauac |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence ath-miR2111a-5p |
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Accession | MIMAT0011150 |
Previous IDs | ath-miR2111a |
Sequence |
28 - uaaucugcauccugagguuua - 48 |
Evidence | experimental; Illumina [1-3] |
Mature sequence ath-miR2111a-3p |
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Accession | MIMAT0011151 |
Previous IDs | ath-miR2111a* |
Sequence |
111 - guccucgggaugcggauuacc - 131 |
Evidence | experimental; Illumina [1-3] |
References |
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1 |
PMID:19307293
"Computational and analytical framework for small RNA profiling by high-throughput sequencing"
RNA. 15:992-1002(2009).
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2 | |
3 |
PMID:19854858
"Uncovering small RNA-mediated responses to phosphate deficiency in Arabidopsis by deep sequencing"
Plant Physiol. 151:2120-2132(2009).
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