miRBase entry: bmo-mir-993a

Stem-loop bmo-mir-993a


Accession
MI0010626
Description
Bombyx mori bmo-mir-993a precursor miRNA
Gene family
MIPF0000033; mir-10

Literature search
1 open access papers mention bmo-mir-993a
(4 sentences)

Sequence

404 reads, 87 reads per million, 3 experiments
ggcacauucgugaUCUACCCUGUAGAUCCGGGCUUUUguagauuaauuacaucaGAAGCUCGUCUCUACAGGUAUCUcacggcuggaa
....((.((((((..((((.((((((..((((((((((..............))))))))))..))))))))))..)))))).))...

Structure
ggca  u      UC    C      UC          uagauu 
    ca ucguga  UACC UGUAGA  CGGGCUUUUg      a
    || ||||||  |||| ||||||  ||||||||||       
    gu ggcacU  AUGG ACAUCU  GCUCGAAGac      a
-aag  c      CU    -      CU          uacauu 


Annotation confidence Not enough data
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Genome context
NW_004582018.1: 2433576-2433663 [+]

Database links

Mature bmo-miR-993a-5p

Accession MIMAT0015298
Description Bombyx mori bmo-miR-993a-5p mature miRNA
Sequence 14 - UCUACCCUGUAGAUCCGGGCUUUU - 37
Evidence experimental
Illumina [2]
Database links

Mature bmo-miR-993a-3p

Accession MIMAT0010129
Description Bombyx mori bmo-miR-993a-3p mature miRNA
Sequence 55 - GAAGCUCGUCUCUACAGGUAUCU - 77
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148