miRBase entry: bmo-mir-965

Stem-loop bmo-mir-965


Accession
MI0010623
Description
Bombyx mori bmo-mir-965 precursor miRNA
Gene family
MIPF0000708; mir-965

Literature search
5 open access papers mention bmo-mir-965
(8 sentences)

Sequence

3621 reads, 639 reads per million, 3 experiments
auauaaauggcugcauagcuaaaCGGGAGAAGCUAUAGCGCUAUAUGucaauauuaaaaucaUAAGCGUAUAGCUUUUCCCCUUgguuaugcaugcauauucuc
......(((..(((((((((((..(((((((((((((.((((.((((.............))))))))))))))))))))).)))))))))))..)))......GGCUGUUGUUAGGCGAAGUUGGUUUGUGACCGUCACUAACGGGCAGUGUUAAUACGGUUGCUCGUUUUGGCGAUCGCAAAAUGAACUCGCUUGAC

Structure
Error: Sequence and structure lengths do not match for bmo-mir-965.


Annotation confidence High
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Genome context
NW_004582012.1: 8411478-8411581 [-]

Database links

Mature bmo-miR-965-5p

Accession MIMAT0015295
Description Bombyx mori bmo-miR-965-5p mature miRNA
Sequence 24 - CGGGAGAAGCUAUAGCGCUAUAUG - 47
Evidence experimental
Illumina [2]
Database links

Mature bmo-miR-965-3p

Accession MIMAT0010126
Description Bombyx mori bmo-miR-965-3p mature miRNA
Sequence 63 - UAAGCGUAUAGCUUUUCCCCUU - 84
Evidence experimental
Illumina [2]
Database links

References

  1. PubMed ID: 20199675
    MicroRNAs of Bombyx mori identified by Solexa sequencing
    Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
    BMC Genomics (2010) 11:148