Stem-loop sequence tca-mir-970

Accession

MI0010585 (change log)

Description

Tribolium castaneum miR-970 stem loop

Gene family

MIPF0000700; mir-970

Literature search

1 open access papers mention tca-mir-970
(1 sentences)

Stem-loop

   aaac  u       gc    ca         guac       guua 
5'     ga gccggcg  agcu  gcguguguc    ugauagu    u
       || |||||||  ||||  |||||||||    |||||||     
3'     cu uggccgc  ucgg  cgcacacag    acuaucg    c
   uccu  c       ua    --         -aau       auca 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates: ChLG2: 10499950-10500040 [+]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:Mir970
• miRBase Tracker:MI0010585

Mature sequence tca-miR-970-5p

• Accession: MIMAT0019179
• Sequence: 17 - agcucagcgugugucguacugaua - 40
• Evidence: experimental; SOLID [1]
• Database links:
  • RNAcentral:URS0000419DDF_7070

Mature sequence tca-miR-970-3p

• Accession: MIMAT0010092
• Previous IDs: tca-miR-970
• Sequence: 57 - ucauaagacacacgcggcuau - 77
• Evidence: experimental; SOLID [1]
• Database links:
  • RNAcentral:URS00000384A0_7070

References

1. " Griffiths-Jones S Unpublished (2009).
2. PMID:20817720 "Functional shifts in insect microRNA evolution" Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S Genome Biol Evol. 2:686-696(2010).