miRBase entry: lja-MIR396

Stem-loop lja-MIR396


Accession
MI0010581
Description
Lotus japonicus lja-MIR396 precursor miRNA
Gene family
MIPF0000047; MIR396


Sequence

guccucuuuguauucUUCCACAGCUUUCUUGAACUGcauucaauugcaugcaugccaugacacucuuauuuugcgguucaauaaagcugugggaagauauagauaggg
..(((.((((((((.((((((((((((.((((((((((......((((((.....)))).)).........)))))))))).)))))))))))).)))))))).))).

Structure
gu   c        c            C          ---uucaau  -    c 
  ccu uuuguauu UUCCACAGCUUU UUGAACUGca         ug caug a
  ||| |||||||| |||||||||||| ||||||||||         || |||| u
  gga agauauag agggugucgaaa aacuuggcgu         ac guac g
-g   u        a            u          uuuauucuc  a    c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature lja-miR396

Accession MIMAT0010088
Description Lotus japonicus lja-miR396 mature miRNA
Sequence 16 - UUCCACAGCUUUCUUGAACUG - 36
Evidence not_experimental

References

  1. PubMed ID: 19084500
    Identification and expression analysis of miRNAs from nitrogen-fixing soybean nodules
    "Wang Y, Li P, Cao X, Wang X, Zhang A, Li X"
    "Biochem Biophys Res Commun (2009) 378:799-803