miRBase entry: osa-MIR2104

Stem-loop osa-MIR2104


Accession
MI0010565
Description
Oryza sativa osa-MIR2104 precursor miRNA

Literature search
1 open access papers mention osa-MIR2104
(3 sentences)

Sequence

acgggcgcucacgguggcuucgacccucgucucggccgcgugcgguagugcgggaggcaugccguguguaccgGCGGCGAGGGGAUGCGAGCGUGagugccucgg
.((((((((((((.(.((.((..((((((((((((..((((((((((.(((.....))))))))))))).)))).)))))))))).)).).)))))))))).)).

Structure
a  -          g g  u  ga        -    cc          g   g 
 cg ggcgcucacg u gc uc  cccucguc ucgg  gcgugcggua ugc g
 || |||||||||| | || ||  |||||||| ||||  |||||||||| ||| g
 gc ccgugaGUGC A CG AG  GGGAGCGG Ggcc  ugugugccgu acg a
g  u          G G  U  --        C    -a          -   g 


Annotation confidence Not enough data
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Genome context
Chr11: 13372008-13372112 [-]

Database links

Mature osa-miR2104

Accession MIMAT0010072
Description Oryza sativa osa-miR2104 mature miRNA
Sequence 74 - GCGGCGAGGGGAUGCGAGCGUG - 95
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19103661
    Characterization and expression profiles of miRNAs in rice seeds
    "Xue LJ, Zhang JJ, Xue HW"
    "Nucleic Acids Res (2009) 37:916-930