Stem-loop sequence bfl-mir-92c

AccessionMI0010524 (change log)
DescriptionBranchiostoma floridae miR-92c stem-loop
Gene family MIPF0000013; mir-25
Stem-loop 
   ------------uag     a   a  ----    uuu        -----        -uaaaauuua     uuuguuuuu      a         g   aaa       uc 
5'                agggc ggg gg    gaau   gaagugau     uguguuug          gcggu         ggcggg aggucggga aag   caauguu  c
                  ||||| ||| ||    ||||   ||||||||     ||||||||          |||||         |||||| ||||||||| |||   |||||||  a
3'                ucuug ccc cc    uuua   cuucacug     guacagac          cgccg         ucgucc uucggcccu uuc   guuauag  a
   cucuucuuugugacg     -   a  gaau    uuu        uuuca        cucguucuac     ---------      g         g   -ac       cc
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (JGI2; GCF_000003815.1) Overlapping transcripts
GG666522.1: 372242-372441 [+]
intergenic
Clustered miRNAs
< 10kb from bfl-mir-92c
bfl-mir-92cGG666522.1: 372242-372441 [+]
bfl-mir-92bGG666522.1: 372710-372810 [+]
Database links

Mature sequence bfl-miR-92c

Accession MIMAT0010010
Sequence

101 -  

uauugcacuugucccggcuugc

 - 122

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Evidence experimental; cloned [1]

References

1
PMID:19196332 "Characterization of microRNAs in cephalochordates reveals a correlation between microRNA repertoire homology and morphological similarity in chordate evolution" Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng S, Chen L Evol Dev. 11:41-49(2009).