miRBase entry: bfl-let-7b

Stem-loop bfl-let-7b


Accession
MI0010517
Description
Branchiostoma floridae bfl-let-7b precursor miRNA


Sequence

guaugacccaaaaaaagguaacggguuguacagucaucuccaauguuguacuucugAACUAUACAACCUACUACCUCAccuc
...............(((((..((((((((.(((((..................)).))).))))))))..)))))......

Structure
guaugacccaaaaaa     ac        c   -  ucuccaau 
               aggua  ggguugua agu ca        g
               |||||  |||||||| ||| ||         
               UCCAU  UCCAACAU UCA gu        u
---------cuccAC     CA        A   A  cuucaugu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
GG666478.1: 2706003-2706084 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from bfl-let-7b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bfl-let-7b

Accession MIMAT0010006
Description Branchiostoma floridae bfl-let-7b mature miRNA
Sequence 57 - AACUAUACAACCUACUACCUCA - 78
Evidence experimental
cloned [1]

References

  1. PubMed ID: 19196332
    Characterization of microRNAs in cephalochordates reveals a correlation between microRNA repertoire homology and morphological similarity in chordate evolution
    "Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng S, Chen L"
    "Evol Dev (2009) 11:41-49