miRBase entry: bfl-mir-2064

Stem-loop bfl-mir-2064

Accession

MI0010499

Description

Branchiostoma floridae bfl-mir-2064 precursor miRNA

Gene family

MIPF0001727; mir-2064

Sequence

cauucagccaccuuguccacgguugcauuguguuggucuuuguagcgugugaacaAAGCAGCACUGUGCAACUGUGUagaug
..............((((((((((((((.((((((..((((((.........)))))))))))).)))))))))))..))).

Structure

cauucagccaccuu   --           u      gu      agc 
              guc  cacgguugcau guguug  cuuugu   g
              |||  ||||||||||| ||||||  ||||||   u
              uag  GUGUCAACGUG CACGAC  GAAaca   g
-------------g   aU           U      --      agu

Annotation confidence Not enough data

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Genome context

GG666463.1: 1079951-1080032 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-2064

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature bfl-miR-2064

Accession	MIMAT0009990
Description	Branchiostoma floridae bfl-miR-2064 mature miRNA
Sequence	56 - AAGCAGCACUGUGCAACUGUGU - 77
Evidence	experimental cloned [1]

References

PubMed ID: 19196332
Characterization of microRNAs in cephalochordates reveals a correlation between microRNA repertoire homology and morphological similarity in chordate evolution
"Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng S, Chen L"
"Evol Dev (2009) 11:41-49